Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein (family 5) | CLV75_4368 | Not Available | Positive | 4373008 - 4373826 | 29330.8 |
| ribosome maturation factor rimp | CLV75_4369 | Not Available | Positive | 4373987 - 4374577 | 21739.6 |
| nusa antitermination factor | CLV75_4370 | Not Available | Positive | 4374577 - 4376190 | 59858.7 |
| hypothetical protein | CLV75_4371 | Not Available | Positive | 4376213 - 4376836 | 22153.5 |
| translation initiation factor 2 (bif-2) | CLV75_4372 | Not Available | Positive | 4376845 - 4379322 | 89236.9 |
| arylformamidase | CLV75_4373 | Not Available | Negative | 4379385 - 4380215 | 30251.8 |
| tryptophan 2,3-dioxygenase | CLV75_4374 | Not Available | Negative | 4380219 - 4381100 | 34013.7 |
| l-threonine 3-dehydrogenase | CLV75_4375 | Not Available | Negative | 4381164 - 4382207 | 37328.2 |
| 2-amino-3-ketobutyrate coenzyme a ligase | CLV75_4376 | Not Available | Negative | 4382207 - 4383391 | 42817.7 |
| xre family transcriptional regulator | CLV75_4377 | Not Available | Negative | 4383501 - 4384064 | 20280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
