Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor cytidylyltransferase | CLV75_0397 | Not Available | Positive | 399240 - 400241 | 34517.9 |
| carbon-monoxide dehydrogenase small subunit | CLV75_0398 | Not Available | Positive | 400396 - 400881 | 16769.9 |
| xanthine dehydrogenase molybdenum binding subunit apoprotein | CLV75_0399 | Not Available | Positive | 400933 - 403293 | 83996.0 |
| carbon-monoxide dehydrogenase medium subunit | CLV75_0400 | Not Available | Positive | 403389 - 404180 | 27258.2 |
| rpir family transcriptional regulator | CLV75_0401 | Not Available | Negative | 404226 - 405125 | 33334.9 |
| uncharacterized protein (duf849 family) | CLV75_0402 | Not Available | Positive | 405234 - 405995 | 27628.7 |
| hypothetical protein | CLV75_0403 | Not Available | Positive | 405992 - 407308 | 47205.6 |
| hypothetical protein | CLV75_0404 | Not Available | Positive | 407385 - 407480 | 3342.17 |
| translation initiation factor 3 (bif-3) | CLV75_0405 | Not Available | Negative | 407441 - 407875 | 16744.7 |
| ferredoxin--nadp+ reductase | CLV75_0406 | Not Available | Negative | 408148 - 408981 | 30951.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
