Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_4348 | Not Available | Negative | 4358760 - 4359017 | 9453.34 |
| ribonuclease d | CLV75_4349 | Not Available | Positive | 4359151 - 4359765 | 22693.1 |
| arabinose-5-phosphate isomerase | CLV75_4350 | Not Available | Positive | 4359762 - 4360724 | 33907.2 |
| lipopolysaccharide export system protein lptc | CLV75_4351 | Not Available | Positive | 4360738 - 4361337 | 21490.7 |
| lipopolysaccharide export system protein lpta | CLV75_4352 | Not Available | Positive | 4361365 - 4361832 | 16291.3 |
| lipopolysaccharide export system atp-binding protein | CLV75_4353 | Not Available | Positive | 4361832 - 4362590 | 28134.1 |
| sigma 54 modulation protein /ssu ribosomal protein s30p | CLV75_4354 | Not Available | Positive | 4362843 - 4363406 | 20817.6 |
| phosphotransferase iia-like nitrogen-regulatory protein ptsn | CLV75_4355 | Not Available | Positive | 4363465 - 4363929 | 16393.9 |
| uncharacterized protein ykwd | CLV75_4356 | Not Available | Negative | 4364512 - 4365027 | 18665.2 |
| lipoprotein-anchoring transpeptidase erfk/srfk | CLV75_4357 | Not Available | Positive | 4365197 - 4365796 | 22336.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
