Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | CLV75_4308 | Not Available | Positive | 4322215 - 4322700 | 17340.9 |
| hypothetical protein | CLV75_4309 | Not Available | Negative | 4322704 - 4323051 | 12882.0 |
| putative membrane protein | CLV75_4310 | Not Available | Negative | 4323087 - 4323797 | 26124.2 |
| glycolate oxidase | CLV75_4311 | Not Available | Positive | 4323878 - 4325317 | 51335.0 |
| glycolate oxidase fad binding subunit | CLV75_4312 | Not Available | Positive | 4325354 - 4326457 | 39005.6 |
| glycolate oxidase iron-sulfur subunit | CLV75_4313 | Not Available | Positive | 4326461 - 4327774 | 48054.1 |
| trypsin | CLV75_4314 | Not Available | Positive | 4327892 - 4328677 | 28379.0 |
| protease ydgd | CLV75_4315 | Not Available | Positive | 4328674 - 4329492 | 29065.9 |
| molecular chaperone ibpa | CLV75_4316 | Not Available | Positive | 4329614 - 4330081 | 17264.4 |
| hypothetical protein | CLV75_4317 | Not Available | Positive | 4330463 - 4332184 | 64516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
