Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | CLV75_4298 | Not Available | Positive | 4313838 - 4314743 | 33736.2 |
| endonuclease/exonuclease/phosphatase family protein | CLV75_4299 | Not Available | Negative | 4314754 - 4315776 | 37228.9 |
| hypothetical protein | CLV75_4300 | Not Available | Negative | 4315773 - 4316552 | 28099.8 |
| 3-isopropylmalate dehydratase small subunit | CLV75_4301 | Not Available | Negative | 4316934 - 4317539 | 22763.2 |
| uncharacterized membrane protein hded (duf308 family) | CLV75_4302 | Not Available | Negative | 4317582 - 4318136 | 19583.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | CLV75_4303 | Not Available | Negative | 4318175 - 4319578 | 50509.3 |
| hypothetical protein | CLV75_4304 | Not Available | Negative | 4319622 - 4319717 | 3586.35 |
| mechanosensitive ion channel-like protein | CLV75_4305 | Not Available | Positive | 4319728 - 4321173 | 53866.2 |
| ribosome-associated protein | CLV75_4306 | Not Available | Positive | 4321210 - 4321698 | 17821.2 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | CLV75_4307 | Not Available | Positive | 4321743 - 4322213 | 16932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
