Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | CLV75_4288 | Not Available | Positive | 4303898 - 4304455 | 19804.5 |
| hypothetical protein | CLV75_4289 | Not Available | Positive | 4304468 - 4304737 | 9895.42 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | CLV75_4290 | Not Available | Positive | 4304831 - 4305685 | 31271.2 |
| aromatic amino acid aminotransferase | CLV75_4291 | Not Available | Positive | 4305685 - 4306869 | 42970.5 |
| ammonium transporter | CLV75_4292 | Not Available | Negative | 4306937 - 4308259 | 46304.1 |
| nitrogen regulatory protein p-ii family | CLV75_4293 | Not Available | Negative | 4308293 - 4308691 | 14471.8 |
| 1a family penicillin-binding protein | CLV75_4294 | Not Available | Positive | 4308889 - 4311075 | 78330.7 |
| 3-isopropylmalate dehydrogenase | CLV75_4295 | Not Available | Negative | 4311132 - 4312235 | 39663.5 |
| peroxiredoxin | CLV75_4296 | Not Available | Positive | 4312327 - 4312854 | 18883.5 |
| lysr family transcriptional regulator | CLV75_4297 | Not Available | Negative | 4312861 - 4313754 | 32510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
