Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 2 (cut1 family) | CLV75_4268 | Not Available | Negative | 4279583 - 4280440 | 31845.9 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV75_4269 | Not Available | Negative | 4280440 - 4281321 | 32577.2 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV75_4270 | Not Available | Negative | 4281379 - 4282689 | 47137.8 |
| lysr family transcriptional regulator | CLV75_4271 | Not Available | Positive | 4282871 - 4283785 | 34220.3 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | CLV75_4272 | Not Available | Positive | 4284046 - 4286022 | 71136.8 |
| hypothetical protein | CLV75_4273 | Not Available | Negative | 4286076 - 4286170 | 3344.8 |
| Trna-met | Not Available | Not Available | Positive | 4286189 - 4286265 | Not Available |
| hypothetical protein | CLV75_4275 | Not Available | Positive | 4286754 - 4289591 | 105971.0 |
| hypothetical protein | CLV75_4276 | Not Available | Negative | 4289584 - 4290990 | 50580.0 |
| tolb-like protein | CLV75_4277 | Not Available | Negative | 4291046 - 4292833 | 66210.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
