Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_4258 | Not Available | Negative | 4268110 - 4269462 | 48471.7 |
| iclr family transcriptional regulator | CLV75_4259 | Not Available | Negative | 4269488 - 4270273 | 28420.3 |
| tripartite-type tricarboxylate transporter receptor subunit tctc | CLV75_4260 | Not Available | Positive | 4270398 - 4271330 | 32493.5 |
| tripartite tricarboxylate transporter tctb family protein | CLV75_4261 | Not Available | Positive | 4271393 - 4271929 | 20357.6 |
| putative tricarboxylic transport membrane protein | CLV75_4262 | Not Available | Positive | 4271938 - 4273470 | 54291.3 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | CLV75_4263 | Not Available | Positive | 4273442 - 4274962 | 53813.7 |
| uncharacterized protein (upf0261 family) | CLV75_4264 | Not Available | Positive | 4274989 - 4276224 | 44150.0 |
| 4-aminobutyrate aminotransferase-like enzyme | CLV75_4265 | Not Available | Positive | 4276245 - 4277534 | 47061.2 |
| ser/thr protein kinase rdoa (mazf antagonist) | CLV75_4266 | Not Available | Positive | 4277537 - 4278463 | 34898.3 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_4267 | Not Available | Negative | 4278524 - 4279579 | 38373.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
