Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_4248 | Not Available | Positive | 4258633 - 4259004 | 13938.9 |
| acetolactate synthase-1/2/3 large subunit | CLV75_4249 | Not Available | Positive | 4259161 - 4260834 | 61174.4 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | CLV75_4250 | Not Available | Positive | 4260831 - 4262216 | 49727.1 |
| cobalt/nickel transport protein | CLV75_4251 | Not Available | Positive | 4262662 - 4263444 | 28382.6 |
| cobalt/nickel transport system permease protein | CLV75_4252 | Not Available | Positive | 4263451 - 4264062 | 20692.2 |
| nickel transport protein | CLV75_4253 | Not Available | Positive | 4264059 - 4264640 | 20336.5 |
| cobalt/nickel transport system permease protein | CLV75_4254 | Not Available | Positive | 4264640 - 4265422 | 29334.2 |
| cobalt/nickel transport system atp-binding protein | CLV75_4255 | Not Available | Positive | 4265419 - 4266069 | 23496.5 |
| glycosyltransferase involved in cell wall biosynthesis | CLV75_4256 | Not Available | Negative | 4266147 - 4267394 | 44912.2 |
| marr family transcriptional regulator | CLV75_4257 | Not Available | Positive | 4267633 - 4268073 | 16627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
