Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | CLV75_4225 | Not Available | Positive | 4230987 - 4232129 | 42464.9 |
| peptide/nickel transport system atp-binding protein | CLV75_4226 | Not Available | Positive | 4232126 - 4233112 | 35574.5 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | CLV75_4227 | Not Available | Positive | 4233117 - 4234115 | 36792.1 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | CLV75_4228 | Not Available | Negative | 4234358 - 4236175 | 63644.1 |
| aspartate/methionine/tyrosine aminotransferase | CLV75_4229 | Not Available | Negative | 4236461 - 4237618 | 43002.3 |
| aconitase | CLV75_4231 | Not Available | Negative | 4238165 - 4240957 | 100835.0 |
| hypothetical protein | CLV75_4232 | Not Available | Positive | 4241273 - 4241407 | 4605.5 |
| uncharacterized protein duf1045 | CLV75_4233 | Not Available | Positive | 4241498 - 4242169 | 25166.5 |
| abc-type phosphate/phosphonate transport system substrate-binding protein | CLV75_4234 | Not Available | Negative | 4242219 - 4242959 | 27894.2 |
| arsr family transcriptional regulator | CLV75_4235 | Not Available | Positive | 4243081 - 4243914 | 30460.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
