Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | CLV75_4215 | Not Available | Positive | 4219465 - 4220238 | 27914.4 |
| histidinol phosphatase-like enzyme (inositol monophosphatase family) | CLV75_4216 | Not Available | Positive | 4220257 - 4221045 | 28227.5 |
| putative n-formylglutamate amidohydrolase | CLV75_4217 | Not Available | Positive | 4221173 - 4221934 | 27899.2 |
| glutamine synthetase | CLV75_4218 | Not Available | Positive | 4221919 - 4223280 | 50691.9 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | CLV75_4219 | Not Available | Positive | 4223370 - 4224752 | 49310.7 |
| alcohol dehydrogenase class iv | CLV75_4220 | Not Available | Positive | 4224818 - 4225963 | 40481.4 |
| eama-like transporter family protein | CLV75_4221 | Not Available | Positive | 4225974 - 4226813 | 29401.9 |
| deor family transcriptional regulator | CLV75_4222 | Not Available | Positive | 4226990 - 4227835 | 29895.2 |
| peptide/nickel transport system substrate-binding protein | CLV75_4223 | Not Available | Positive | 4227865 - 4229904 | 74924.2 |
| peptide/nickel transport system permease protein | CLV75_4224 | Not Available | Positive | 4229977 - 4230981 | 36980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
