Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-subunit fatty acid transport protein | CLV75_0377 | Not Available | Negative | 379946 - 381169 | 43543.7 |
| drug/metabolite transporter (dmt)-like permease | CLV75_0378 | Not Available | Negative | 381287 - 382177 | 32195.0 |
| gmp synthase (glutamine-hydrolysing) | CLV75_0379 | Not Available | Negative | 382302 - 383861 | 57516.6 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | CLV75_0380 | Not Available | Positive | 383932 - 384372 | 15445.0 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_0381 | Not Available | Positive | 384508 - 386052 | 55791.4 |
| hypothetical protein | CLV75_0382 | Not Available | Negative | 386053 - 386340 | 10731.0 |
| hypothetical protein | CLV75_0383 | Not Available | Positive | 386593 - 387690 | 40430.7 |
| lysr family hydrogen peroxide-inducible transcriptional activator | CLV75_0384 | Not Available | Positive | 387743 - 388666 | 33519.5 |
| peroxiredoxin | CLV75_0385 | Not Available | Negative | 388718 - 389266 | 20194.9 |
| lipoic acid synthetase | CLV75_0386 | Not Available | Positive | 389531 - 390481 | 35262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
