Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate thiokinase small subunit | CLV75_4153 | Not Available | Negative | 4145126 - 4146016 | 30962.5 |
| malate thiokinase large subunit | CLV75_4154 | Not Available | Negative | 4146016 - 4147212 | 43123.7 |
| aspartate aminotransferase-like enzyme | CLV75_4155 | Not Available | Negative | 4147241 - 4148482 | 44667.1 |
| luxr family two component transcriptional regulator | CLV75_4156 | Not Available | Positive | 4148701 - 4149330 | 22885.8 |
| hipa-like protein | CLV75_4157 | Not Available | Negative | 4149393 - 4150088 | 25972.3 |
| sam (sterile alpha motif) domain-containing protein | CLV75_4159 | Not Available | Positive | 4151192 - 4154791 | 132627.0 |
| uncharacterized protein duf4242 | CLV75_4160 | Not Available | Positive | 4154818 - 4155075 | 9883.67 |
| fad/fmn-containing dehydrogenase | CLV75_4161 | Not Available | Positive | 4155193 - 4156608 | 50831.0 |
| uncharacterized protein (tigr02453 family) | CLV75_4162 | Not Available | Negative | 4156762 - 4157421 | 24951.9 |
| tfox-like protein | CLV75_4163 | Not Available | Negative | 4157434 - 4157778 | 12548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
