Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type uncharacterized transport system substrate-binding protein | CLV75_4113 | Not Available | Positive | 4104967 - 4105614 | 23933.2 |
| abc-type nickel/cobalt efflux system permease component rcna | CLV75_4114 | Not Available | Positive | 4105599 - 4106537 | 33246.8 |
| trna pseudouridine38-40 synthase | CLV75_4115 | Not Available | Negative | 4106540 - 4107307 | 28473.8 |
| hypothetical protein | CLV75_4116 | Not Available | Positive | 4107415 - 4108830 | 52115.1 |
| l-amino acid n-acyltransferase ynca | CLV75_4117 | Not Available | Positive | 4108827 - 4109282 | 16771.7 |
| putative membrane protein | CLV75_4118 | Not Available | Positive | 4109275 - 4110264 | 34908.7 |
| vit1/ccc1 family predicted fe2+/mn2+ transporter | CLV75_4119 | Not Available | Positive | 4110319 - 4111029 | 25240.4 |
| uncharacterized protein ybjt (duf2867 family) | CLV75_4120 | Not Available | Positive | 4111104 - 4112429 | 46684.5 |
| putative membrane protein | CLV75_4121 | Not Available | Positive | 4112429 - 4112911 | 17832.5 |
| putative membrane protein | CLV75_4122 | Not Available | Positive | 4113013 - 4115721 | 96080.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
