Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a 3-o-deacylase pagl | CLV75_4093 | Not Available | Negative | 4079197 - 4079682 | 17268.9 |
| hypothetical protein | CLV75_4094 | Not Available | Positive | 4079884 - 4080981 | 39700.3 |
| zc3h12a-like ribonuclease protein | CLV75_4095 | Not Available | Positive | 4081095 - 4081862 | 28614.8 |
| lysr family transcriptional regulator | CLV75_4096 | Not Available | Positive | 4082050 - 4082931 | 32392.6 |
| nad-dependent formate dehydrogenase flavoprotein subunit | CLV75_4097 | Not Available | Positive | 4083017 - 4084720 | 61778.6 |
| nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur protein | CLV75_4098 | Not Available | Positive | 4084732 - 4087518 | 102300.0 |
| autotransporter secretion inner membrane protein tamb | CLV75_4099 | Not Available | Negative | 4087572 - 4091654 | 140805.0 |
| autotransporter secretion outer membrane protein tama | CLV75_4100 | Not Available | Negative | 4091654 - 4093459 | 65174.5 |
| putative membrane protein | CLV75_4101 | Not Available | Negative | 4093613 - 4094836 | 46293.2 |
| lysr family transcriptional regulator | CLV75_4102 | Not Available | Positive | 4094933 - 4095847 | 33733.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
