Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | CLV75_4073 | Not Available | Positive | 4062050 - 4063231 | 42504.7 |
| trna (guanine-n(7)-)-methyltransferase | CLV75_4074 | Not Available | Positive | 4063317 - 4064039 | 27275.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CLV75_4075 | Not Available | Positive | 4064109 - 4065467 | 46937.6 |
| cytidylate kinase | CLV75_4076 | Not Available | Positive | 4065467 - 4066090 | 21959.3 |
| yhs domain-containing protein | CLV75_4077 | Not Available | Negative | 4066115 - 4066591 | 16383.2 |
| hypothetical protein | CLV75_4078 | Not Available | Positive | 4066810 - 4067346 | 19529.6 |
| hypothetical protein | CLV75_4079 | Not Available | Positive | 4067435 - 4067785 | 12636.2 |
| ssu ribosomal protein s1p | CLV75_4080 | Not Available | Positive | 4068023 - 4069699 | 61140.5 |
| integration host factor subunit beta | CLV75_4081 | Not Available | Positive | 4069970 - 4070254 | 10821.0 |
| uncharacterized protein duf1049 | CLV75_4082 | Not Available | Positive | 4070258 - 4070611 | 13236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
