Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_4043 | Not Available | Positive | 4030644 - 4032188 | 56005.4 |
| tetr family transcriptional regulator | CLV75_4044 | Not Available | Positive | 4032189 - 4032872 | 26225.2 |
| sarcosine oxidase subunit beta | CLV75_4045 | Not Available | Positive | 4032859 - 4034163 | 47502.6 |
| indolepyruvate ferredoxin oxidoreductase | CLV75_4046 | Not Available | Negative | 4034160 - 4037555 | 124256.0 |
| dna-binding lrp family transcriptional regulator | CLV75_4047 | Not Available | Positive | 4037700 - 4038161 | 17244.8 |
| uncharacterized protein duf3307 | CLV75_4048 | Not Available | Negative | 4038165 - 4038554 | 14679.2 |
| abc-type multidrug transport system fused atpase/permease subunit | CLV75_4049 | Not Available | Positive | 4038724 - 4041765 | 111863.0 |
| arsr family transcriptional regulator | CLV75_4050 | Not Available | Negative | 4041771 - 4042112 | 12507.1 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | CLV75_4051 | Not Available | Negative | 4042172 - 4043404 | 44735.6 |
| zn-dependent alcohol dehydrogenase | CLV75_4052 | Not Available | Negative | 4043425 - 4044519 | 37749.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
