Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | CLV75_4033 | Not Available | Positive | 4016996 - 4019383 | 88314.2 |
| hypothetical protein | CLV75_4034 | Not Available | Positive | 4019352 - 4019501 | 4853.86 |
| coa transferase family iii | CLV75_4035 | Not Available | Negative | 4019469 - 4020824 | 48103.3 |
| peptide/nickel transport system permease protein | CLV75_4036 | Not Available | Negative | 4020821 - 4021975 | 42803.1 |
| peptide/nickel transport system permease protein | CLV75_4037 | Not Available | Negative | 4021972 - 4023000 | 37910.2 |
| peptide/nickel transport system substrate-binding protein | CLV75_4038 | Not Available | Negative | 4023015 - 4024928 | 71865.0 |
| peptide/nickel transport system atp-binding protein | CLV75_4039 | Not Available | Negative | 4024921 - 4026693 | 64750.4 |
| s-adenosylmethionine-dependent methyltransferase | CLV75_4040 | Not Available | Positive | 4026922 - 4027419 | 18288.8 |
| glutathione s-transferase | CLV75_4041 | Not Available | Positive | 4027511 - 4028140 | 23001.4 |
| dimethylglycine dehydrogenase | CLV75_4042 | Not Available | Positive | 4028239 - 4030641 | 88379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
