Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | CLV75_4001 | Not Available | Negative | 3983435 - 3984031 | 22375.6 |
| phenylacetate-coa ligase | CLV75_4002 | Not Available | Negative | 3984054 - 3985361 | 48489.8 |
| acyl-coa thioesterase | CLV75_4003 | Not Available | Negative | 3985377 - 3985805 | 15157.8 |
| enoyl-coa hydratase | CLV75_4004 | Not Available | Negative | 3985807 - 3986610 | 28227.6 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_4005 | Not Available | Positive | 3986793 - 3987812 | 35957.6 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_4006 | Not Available | Positive | 3987867 - 3988370 | 18509.3 |
| tripartite atp-independent transporter dctm subunit | CLV75_4007 | Not Available | Positive | 3988370 - 3989722 | 47633.9 |
| oxepin-coa hydrolase/3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | CLV75_4008 | Not Available | Positive | 3989751 - 3991775 | 72389.3 |
| paax family transcriptional regulator | CLV75_4009 | Not Available | Positive | 3991829 - 3992632 | 29451.5 |
| cation diffusion facilitator czcd-associated flavoprotein czco | CLV75_4010 | Not Available | Positive | 3992716 - 3994188 | 54377.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
