Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | CLV75_3908 | Not Available | Negative | 3891297 - 3892229 | 33753.1 |
| iron(iii) transport system substrate-binding protein | CLV75_3909 | Not Available | Positive | 3892412 - 3893437 | 37105.4 |
| iron(iii) transport system permease protein | CLV75_3910 | Not Available | Positive | 3893438 - 3895651 | 80139.9 |
| iron(iii) transport system atp-binding protein | CLV75_3911 | Not Available | Positive | 3895663 - 3896724 | 38118.0 |
| broad specificity phosphatase phoe | CLV75_3912 | Not Available | Positive | 3896725 - 3897291 | 20919.4 |
| myo-inositol-1(or 4)-monophosphatase | CLV75_3913 | Not Available | Negative | 3897296 - 3898087 | 28372.3 |
| cytochrome p450 | CLV75_3914 | Not Available | Negative | 3898193 - 3899392 | 45218.5 |
| winged helix family two component transcriptional regulator | CLV75_3915 | Not Available | Negative | 3899584 - 3900297 | 26660.9 |
| pas domain-containing protein | CLV75_3916 | Not Available | Negative | 3900290 - 3902527 | 82326.9 |
| pimeloyl-acp methyl ester carboxylesterase | CLV75_3917 | Not Available | Positive | 3902781 - 3903620 | 29911.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
