Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-2-deoxygluconokinase | CLV75_3897 | Not Available | Positive | 3880124 - 3881101 | 33974.0 |
| 5-deoxyglucuronate isomerase | CLV75_3898 | Not Available | Positive | 3881114 - 3881971 | 32008.9 |
| fructose-bisphosphate aldolase class ii | CLV75_3899 | Not Available | Positive | 3881968 - 3882798 | 29111.6 |
| myo-inositol 2-dehydrogenase | CLV75_3900 | Not Available | Positive | 3882800 - 3883789 | 35029.7 |
| tryptophan halogenase | CLV75_3902 | Not Available | Positive | 3885046 - 3886731 | 63794.6 |
| had superfamily hydrolase (tigr01459 family) | CLV75_3903 | Not Available | Negative | 3886900 - 3887838 | 33522.9 |
| phosphonate transport system permease protein | CLV75_3904 | Not Available | Negative | 3887802 - 3888617 | 29734.0 |
| phosphonate transport system permease protein | CLV75_3905 | Not Available | Negative | 3888617 - 3889432 | 29553.8 |
| phosphonate transport system atp-binding protein | CLV75_3906 | Not Available | Negative | 3889429 - 3890223 | 29461.8 |
| phosphonate transport system substrate-binding protein | CLV75_3907 | Not Available | Negative | 3890282 - 3891256 | 35546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
