Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding narl/fixj family response regulator | CLV75_0347 | Not Available | Positive | 344421 - 345383 | 36718.0 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | CLV75_0348 | Not Available | Positive | 345512 - 346498 | 35805.1 |
| peptide/nickel transport system atp-binding protein | CLV75_0349 | Not Available | Negative | 346615 - 348702 | 76442.5 |
| peptide/nickel transport system permease protein | CLV75_0350 | Not Available | Negative | 348797 - 350260 | 53007.4 |
| peptide/nickel transport system permease protein | CLV75_0351 | Not Available | Negative | 350274 - 351320 | 38617.8 |
| peptide/nickel transport system substrate-binding protein | CLV75_0352 | Not Available | Negative | 351440 - 353110 | 61506.1 |
| trna dimethylallyltransferase | CLV75_0353 | Not Available | Negative | 353477 - 354376 | 33517.1 |
| uridylate kinase | CLV75_0354 | Not Available | Positive | 354474 - 355226 | 27082.6 |
| selenocysteine lyase/cysteine desulfurase | CLV75_0355 | Not Available | Positive | 355505 - 356731 | 44904.2 |
| deoxyribodipyrimidine photo-lyase | CLV75_0356 | Not Available | Positive | 356779 - 358212 | 54487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
