Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion channel | CLV75_3837 | Not Available | Negative | 3818046 - 3818546 | 17989.0 |
| upf0176 protein | CLV75_3838 | Not Available | Negative | 3818611 - 3819516 | 34154.4 |
| nicotinamidase/pyrazinamidase | CLV75_3839 | Not Available | Positive | 3819613 - 3820206 | 21262.0 |
| hypothetical protein | CLV75_3840 | Not Available | Negative | 3820210 - 3820740 | 19606.6 |
| nicotinate phosphoribosyltransferase | CLV75_3841 | Not Available | Positive | 3820905 - 3822197 | 49273.0 |
| aldehyde dehydrogenase (nad+) | CLV75_3842 | Not Available | Negative | 3822194 - 3823645 | 50966.8 |
| peptide/nickel transport system atp-binding protein | CLV75_3843 | Not Available | Negative | 3823686 - 3825284 | 58289.0 |
| peptide/nickel transport system permease protein | CLV75_3844 | Not Available | Negative | 3825281 - 3826096 | 28555.6 |
| peptide/nickel transport system permease protein | CLV75_3845 | Not Available | Negative | 3826093 - 3827040 | 34375.0 |
| hypothetical protein | CLV75_3846 | Not Available | Negative | 3827081 - 3828100 | 36934.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
