Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | CLV75_3807 | Not Available | Negative | 3790217 - 3791428 | 43241.6 |
| peroxiredoxin | CLV75_3808 | Not Available | Positive | 3791528 - 3792013 | 16778.2 |
| glycine zipper 2tm protein | CLV75_3809 | Not Available | Positive | 3792116 - 3792361 | 7705.45 |
| ef hand domain-containing protein | CLV75_3810 | Not Available | Positive | 3792373 - 3792720 | 12731.6 |
| hypothetical protein | CLV75_3811 | Not Available | Positive | 3792746 - 3793054 | 10499.5 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CLV75_3812 | Not Available | Negative | 3793037 - 3793342 | 11443.6 |
| hypothetical protein | CLV75_3813 | Not Available | Negative | 3793339 - 3794526 | 44266.8 |
| glycerophosphoryl diester phosphodiesterase | CLV75_3814 | Not Available | Negative | 3794572 - 3795342 | 28060.4 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV75_3815 | Not Available | Negative | 3795339 - 3795794 | 15481.6 |
| phospholipid-binding lipoprotein mlaa | CLV75_3816 | Not Available | Positive | 3796091 - 3796906 | 30150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
