Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | CLV75_3777 | Not Available | Positive | 3769838 - 3770548 | 26049.9 |
| hypothetical protein | CLV75_3778 | Not Available | Negative | 3770594 - 3771028 | 16249.3 |
| arac family transcriptional regulator of adaptative response/methylated-dna-[protein]-cysteine methyltransferase | CLV75_3779 | Not Available | Negative | 3771205 - 3772056 | 31384.7 |
| marr family protein | CLV75_3780 | Not Available | Positive | 3772156 - 3772626 | 17297.9 |
| nicotinamidase-related amidase | CLV75_3781 | Not Available | Positive | 3772628 - 3773269 | 23202.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | CLV75_3782 | Not Available | Positive | 3773366 - 3774010 | 24156.2 |
| sugar/nucleoside kinase (ribokinase family) | CLV75_3783 | Not Available | Positive | 3774007 - 3774996 | 35124.7 |
| merr family transcriptional regulator | CLV75_3784 | Not Available | Negative | 3775010 - 3775399 | 14543.4 |
| hypothetical protein | CLV75_3785 | Not Available | Positive | 3775489 - 3775812 | 11646.7 |
| hypothetical protein | CLV75_3786 | Not Available | Positive | 3775889 - 3776035 | 5172.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
