Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylglycine dehydrogenase | CLV75_0337 | Not Available | Negative | 333662 - 336079 | 88750.2 |
| mg2+/co2+ transporter corb | CLV75_0338 | Not Available | Negative | 336185 - 337492 | 47546.2 |
| integrase/recombinase xerd | CLV75_0339 | Not Available | Negative | 337556 - 338512 | 35120.1 |
| hypothetical protein | CLV75_0340 | Not Available | Negative | 338515 - 340041 | 55013.9 |
| hypothetical protein | CLV75_0341 | Not Available | Negative | 340031 - 340180 | 5499.89 |
| shikimate kinase | CLV75_0342 | Not Available | Positive | 340260 - 340847 | 21501.7 |
| 3-dehydroquinate synthase | CLV75_0343 | Not Available | Positive | 340847 - 341956 | 39288.3 |
| zn-dependent protease | CLV75_0344 | Not Available | Negative | 341964 - 343034 | 38011.2 |
| single-strand binding protein | CLV75_0345 | Not Available | Negative | 343053 - 343538 | 17142.9 |
| transglycosylase-like protein with slt domain | CLV75_0346 | Not Available | Positive | 343746 - 344324 | 21632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
