Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | CLV75_3747 | Not Available | Negative | 3740123 - 3741463 | 49667.2 |
| beta-barrel assembly complex subunit bamf | CLV75_3748 | Not Available | Negative | 3741549 - 3742064 | 18248.7 |
| signal peptidase ii | CLV75_3749 | Not Available | Negative | 3742115 - 3742585 | 16925.1 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | CLV75_3750 | Not Available | Negative | 3742585 - 3744240 | 58557.7 |
| putative heparinase superfamily protein | CLV75_3751 | Not Available | Negative | 3744197 - 3745936 | 63684.4 |
| 16s rrna (cytosine967-c5)-methyltransferase | CLV75_3752 | Not Available | Negative | 3746025 - 3747284 | 45333.6 |
| hypothetical protein | CLV75_3753 | Not Available | Positive | 3747286 - 3747558 | 10025.9 |
| lysr family transcriptional regulator | CLV75_3754 | Not Available | Negative | 3747559 - 3748416 | 31353.8 |
| gamma-butyrobetaine dioxygenase | CLV75_3755 | Not Available | Positive | 3748516 - 3749652 | 41582.8 |
| phosphonate degradation associated hdig domain protein | CLV75_3756 | Not Available | Positive | 3749649 - 3750239 | 21913.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
