Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase (nad+, l-lysine-forming) | CLV75_3727 | Not Available | Positive | 3720629 - 3721684 | 37805.6 |
| saccharopine dehydrogenase (nadp+, l-glutamate forming) | CLV75_3728 | Not Available | Positive | 3721688 - 3722830 | 42013.7 |
| uncharacterized protein duf1127 | CLV75_3729 | Not Available | Negative | 3722894 - 3723094 | 7407.88 |
| uncharacterized protein duf1127 | CLV75_3730 | Not Available | Negative | 3723152 - 3723388 | 9144.74 |
| uncharacterized protein duf3775 | CLV75_3731 | Not Available | Negative | 3723554 - 3723871 | 11514.6 |
| hypothetical protein | CLV75_3732 | Not Available | Negative | 3723957 - 3724727 | 29388.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV75_3733 | Not Available | Positive | 3724877 - 3725533 | 24830.8 |
| chrr-like anti-ecfsigma factor | CLV75_3734 | Not Available | Positive | 3725544 - 3726194 | 23090.8 |
| hypothetical protein | CLV75_3735 | Not Available | Positive | 3726247 - 3726648 | 14373.0 |
| dna recombination protein rmuc | CLV75_3736 | Not Available | Negative | 3726652 - 3727881 | 45104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
