Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_3717 | Not Available | Positive | 3711574 - 3711894 | 11260.2 |
| atp-dependent clp protease atp-binding subunit clpb | CLV75_3718 | Not Available | Positive | 3712022 - 3714640 | 95576.4 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | CLV75_3719 | Not Available | Negative | 3714716 - 3715093 | 13266.5 |
| hxlr family transcriptional regulator | CLV75_3720 | Not Available | Positive | 3715134 - 3715661 | 19160.3 |
| sulfoxide reductase catalytic subunit yedy | CLV75_3721 | Not Available | Positive | 3715805 - 3716704 | 33822.1 |
| sulfoxide reductase heme-binding subunit yedz | CLV75_3722 | Not Available | Positive | 3716706 - 3717323 | 23291.8 |
| aminomethyltransferase folate-binding domain-containing protein | CLV75_3723 | Not Available | Negative | 3717621 - 3717732 | 4118.16 |
| n-carbamoyl-l-amino-acid hydrolase | CLV75_3724 | Not Available | Negative | 3718000 - 3719193 | 42870.8 |
| broad specificity phosphatase phoe | CLV75_3725 | Not Available | Positive | 3719339 - 3719989 | 24111.7 |
| glutathione s-transferase | CLV75_3726 | Not Available | Positive | 3720000 - 3720614 | 22177.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
