Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase e1 component | CLV75_3655 | Not Available | Positive | 3654339 - 3656531 | 78854.2 |
| malonyl coa-acyl carrier protein transacylase | CLV75_3656 | Not Available | Positive | 3656528 - 3657562 | 36840.8 |
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_3657 | Not Available | Positive | 3657604 - 3658875 | 45083.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_3658 | Not Available | Negative | 3658879 - 3659580 | 24686.4 |
| lysr family glycine cleavage system transcriptional activator | CLV75_3659 | Not Available | Positive | 3659684 - 3660535 | 31209.3 |
| dna-binding transcriptional lysr family regulator | CLV75_3660 | Not Available | Negative | 3660526 - 3661428 | 33702.6 |
| reductive dehalogenase | CLV75_3661 | Not Available | Positive | 3661506 - 3664718 | 118591.0 |
| carbon-monoxide dehydrogenase medium subunit | CLV75_3662 | Not Available | Positive | 3664846 - 3665712 | 29493.0 |
| carbon-monoxide dehydrogenase small subunit | CLV75_3663 | Not Available | Positive | 3665709 - 3666188 | 17149.6 |
| xanthine dehydrogenase molybdenum binding subunit apoprotein | CLV75_3664 | Not Available | Positive | 3666188 - 3668440 | 79010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
