Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | CLV75_3635 | Not Available | Positive | 3633771 - 3634661 | 32229.7 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | CLV75_3636 | Not Available | Positive | 3634661 - 3635176 | 18886.2 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_3637 | Not Available | Positive | 3635230 - 3635817 | 21000.7 |
| tripartite atp-independent transporter dctm subunit | CLV75_3638 | Not Available | Positive | 3635818 - 3637107 | 45676.2 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_3639 | Not Available | Positive | 3637128 - 3638189 | 38141.0 |
| hypothetical protein | CLV75_3640 | Not Available | Negative | 3638220 - 3638690 | 17536.0 |
| cytochrome c peroxidase | CLV75_3641 | Not Available | Positive | 3638721 - 3639974 | 45762.9 |
| acetate kinase | CLV75_3642 | Not Available | Positive | 3640185 - 3641357 | 42118.2 |
| phosphoglycolate phosphatase | CLV75_3643 | Not Available | Negative | 3641577 - 3642245 | 24220.7 |
| hemin uptake protein hemp | CLV75_3644 | Not Available | Positive | 3642467 - 3642634 | 6001.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
