Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase cbb3-type subunit 4 | CLV75_3615 | Not Available | Positive | 3613632 - 3613838 | 7932.55 |
| cytochrome c oxidase cbb3-type subunit 3 | CLV75_3616 | Not Available | Positive | 3613835 - 3614698 | 31624.5 |
| hypothetical protein | CLV75_3617 | Not Available | Negative | 3614851 - 3615009 | 6211.52 |
| lysr family glycine cleavage system transcriptional activator | CLV75_3618 | Not Available | Positive | 3615110 - 3615985 | 31083.4 |
| cytochrome c oxidase accessory protein fixg | CLV75_3619 | Not Available | Positive | 3616088 - 3617515 | 53865.0 |
| nitrogen fixation protein fixh | CLV75_3620 | Not Available | Positive | 3617518 - 3617976 | 16409.7 |
| cu2+-exporting atpase | CLV75_3621 | Not Available | Positive | 3617981 - 3620158 | 76255.3 |
| cbb3-type cytochrome oxidase maturation protein | CLV75_3622 | Not Available | Positive | 3620164 - 3620322 | 5893.08 |
| protein translocase subunit sece/sec61 gamma | CLV75_3623 | Not Available | Positive | 3620402 - 3620599 | 7121.03 |
| transcription antitermination protein nusg | CLV75_3624 | Not Available | Positive | 3620799 - 3621332 | 20095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
