Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system permease protein | CLV75_3605 | Not Available | Positive | 3601802 - 3602896 | 39604.0 |
| microcin c transport system permease protein | CLV75_3606 | Not Available | Positive | 3602897 - 3604003 | 41165.4 |
| microcin c transport system atp-binding protein | CLV75_3607 | Not Available | Positive | 3604000 - 3605577 | 57643.7 |
| elongation factor g | CLV75_3608 | Not Available | Negative | 3605600 - 3607525 | 69146.5 |
| oxygen-independent coproporphyrinogen-3 oxidase | CLV75_3609 | Not Available | Negative | 3607738 - 3609093 | 50119.9 |
| crp/fnr family transcriptional regulator | CLV75_3610 | Not Available | Positive | 3609155 - 3609898 | 27478.3 |
| putative membrane protein yeaq/ymge (transglycosylase-associated protein family) | CLV75_3611 | Not Available | Positive | 3609944 - 3610198 | 8446.87 |
| universal stress protein family protein | CLV75_3612 | Not Available | Negative | 3610237 - 3611076 | 30494.7 |
| cytochrome c oxidase cbb3-type subunit 1 | CLV75_3613 | Not Available | Positive | 3611270 - 3612877 | 60318.3 |
| cytochrome c oxidase cbb3-type subunit 2 | CLV75_3614 | Not Available | Positive | 3612892 - 3613620 | 27495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
