Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like protein | CLV75_3563 | Not Available | Negative | 3564243 - 3564653 | 15471.8 |
| ribosomal large subunit pseudouridine synthase a | CLV75_3564 | Not Available | Positive | 3564715 - 3565398 | 25896.2 |
| hypothetical protein | CLV75_3565 | Not Available | Negative | 3565395 - 3565592 | 7675.45 |
| wyl domain-containing protein | CLV75_3566 | Not Available | Positive | 3565697 - 3566389 | 26123.2 |
| outer membrane protein ompa-like peptidoglycan-associated protein | CLV75_3567 | Not Available | Positive | 3566508 - 3567179 | 22846.0 |
| chromate reductase | CLV75_3568 | Not Available | Positive | 3567276 - 3567818 | 19573.5 |
| acetyltransferase (gnat) family protein | CLV75_3569 | Not Available | Negative | 3567822 - 3568301 | 18187.9 |
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_3570 | Not Available | Negative | 3568298 - 3569332 | 36331.6 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | CLV75_3571 | Not Available | Positive | 3569388 - 3570053 | 24536.6 |
| drug/metabolite transporter (dmt)-like permease | CLV75_3572 | Not Available | Positive | 3570050 - 3570928 | 31808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
