Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | CLV75_3553 | Not Available | Positive | 3552923 - 3553492 | 20840.7 |
| homoserine/homoserine lactone efflux protein | CLV75_3554 | Not Available | Positive | 3553492 - 3554115 | 21932.5 |
| hypothetical protein | CLV75_3555 | Not Available | Positive | 3554120 - 3554500 | 13845.1 |
| dimethylglycine dehydrogenase | CLV75_3556 | Not Available | Positive | 3554516 - 3556963 | 90889.1 |
| alcohol dehydrogenase | CLV75_3557 | Not Available | Positive | 3556988 - 3558034 | 36420.7 |
| homocysteine s-methyltransferase | CLV75_3558 | Not Available | Positive | 3558047 - 3558940 | 31596.7 |
| arac family transcriptional regulator | CLV75_3559 | Not Available | Positive | 3558950 - 3559930 | 36307.5 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | CLV75_3560 | Not Available | Positive | 3560020 - 3562473 | 89544.4 |
| chloramphenicol-sensitive protein rard | CLV75_3561 | Not Available | Positive | 3562634 - 3563539 | 32063.3 |
| lysophospholipase l1-like esterase | CLV75_3562 | Not Available | Negative | 3563530 - 3564240 | 25694.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
