Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_3523 | Not Available | Negative | 3524642 - 3524938 | 10974.5 |
| hypothetical protein | CLV75_3524 | Not Available | Positive | 3524983 - 3526161 | 41967.5 |
| dna polymerase iii delta subunit | CLV75_3525 | Not Available | Negative | 3526165 - 3527193 | 36500.0 |
| lps-assembly lipoprotein | CLV75_3526 | Not Available | Negative | 3527190 - 3527681 | 17286.4 |
| leucyl-trna synthetase | CLV75_3527 | Not Available | Negative | 3527668 - 3530220 | 94682.2 |
| uncharacterized protein duf3576 | CLV75_3528 | Not Available | Negative | 3530293 - 3530781 | 17344.5 |
| outer membrane protein ompu | CLV75_3529 | Not Available | Positive | 3531064 - 3532071 | 34510.1 |
| hypothetical protein | CLV75_3530 | Not Available | Positive | 3532174 - 3532833 | 23666.4 |
| hypothetical protein | CLV75_3531 | Not Available | Positive | 3532877 - 3533098 | 8179.16 |
| gtp cyclohydrolase ii | CLV75_3532 | Not Available | Negative | 3533314 - 3534408 | 39396.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
