Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_3513 | Not Available | Positive | 3515198 - 3515704 | 18541.1 |
| thioredoxin-like protein | CLV75_3514 | Not Available | Positive | 3515719 - 3516384 | 24405.5 |
| lipid-a-disaccharide kinase | CLV75_3515 | Not Available | Negative | 3516423 - 3517421 | 35363.5 |
| 3-deoxy-d-manno-octulosonic-acid transferase | CLV75_3516 | Not Available | Negative | 3517408 - 3518643 | 45404.5 |
| myo-inositol-1(or 4)-monophosphatase | CLV75_3517 | Not Available | Negative | 3518640 - 3519440 | 29278.6 |
| microcin-processing peptidase 1 | CLV75_3518 | Not Available | Negative | 3519427 - 3520773 | 47282.5 |
| hypothetical protein | CLV75_3519 | Not Available | Negative | 3520898 - 3522421 | 53801.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | CLV75_3520 | Not Available | Positive | 3522554 - 3523303 | 26288.5 |
| enoyl-coa hydratase/carnithine racemase | CLV75_3521 | Not Available | Positive | 3523300 - 3523908 | 21023.7 |
| hypothetical protein | CLV75_3522 | Not Available | Positive | 3523905 - 3524645 | 27275.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
