Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1217 | CLV75_3503 | Not Available | Positive | 3505105 - 3505902 | 29357.9 |
| adenylate/guanylate cyclase | CLV75_3504 | Not Available | Negative | 3506055 - 3507614 | 56989.3 |
| transcriptional regulator | CLV75_3505 | Not Available | Negative | 3507705 - 3508406 | 25646.7 |
| hypothetical protein | CLV75_3506 | Not Available | Negative | 3508378 - 3508665 | 10476.6 |
| hypothetical protein | CLV75_3507 | Not Available | Positive | 3508842 - 3509321 | 18158.3 |
| rnase hii | CLV75_3508 | Not Available | Positive | 3509369 - 3510049 | 24629.7 |
| modification methylase | CLV75_3509 | Not Available | Positive | 3510155 - 3511258 | 41333.2 |
| adenylate/guanylate cyclase | CLV75_3510 | Not Available | Positive | 3511398 - 3512786 | 52211.2 |
| alkane 1-monooxygenase | CLV75_3511 | Not Available | Negative | 3512865 - 3514001 | 44180.3 |
| a/g-specific dna-adenine glycosylase | CLV75_3512 | Not Available | Negative | 3514061 - 3515116 | 39428.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
