Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system permease protein | CLV75_3493 | Not Available | Positive | 3497150 - 3497968 | 29362.5 |
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_3494 | Not Available | Positive | 3497965 - 3499266 | 47411.9 |
| aminoglycoside phosphotransferase (apt) family kinase protein | CLV75_3495 | Not Available | Negative | 3499261 - 3500034 | 28983.5 |
| flagellar basal-body rod modification protein flgd | CLV75_3496 | Not Available | Negative | 3500182 - 3500847 | 23410.3 |
| flagellar hook-length control protein flik | CLV75_3497 | Not Available | Negative | 3500851 - 3502071 | 43568.9 |
| rod binding protein | CLV75_3498 | Not Available | Positive | 3502185 - 3502457 | 9241.0 |
| flgn protein | CLV75_3499 | Not Available | Positive | 3502450 - 3502797 | 12792.3 |
| flagellin | CLV75_3500 | Not Available | Positive | 3503008 - 3504255 | 41888.4 |
| flagellar protein flaf | CLV75_3501 | Not Available | Positive | 3504333 - 3504707 | 13944.6 |
| flagellar protein flbt | CLV75_3502 | Not Available | Positive | 3504707 - 3505108 | 15193.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
