Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase r | CLV75_3483 | Not Available | Positive | 3486136 - 3488394 | 83363.9 |
| uncharacterized protein duf1801 | CLV75_3484 | Not Available | Negative | 3488385 - 3488771 | 14022.8 |
| glutathione s-transferase | CLV75_3485 | Not Available | Negative | 3488768 - 3489466 | 26503.1 |
| putative dna-binding transcriptional regulator yafy | CLV75_3486 | Not Available | Positive | 3489549 - 3490256 | 26367.6 |
| lytic murein transglycosylase | CLV75_3487 | Not Available | Positive | 3490327 - 3491643 | 47909.8 |
| putrescine aminotransferase | CLV75_3488 | Not Available | Negative | 3491683 - 3493080 | 50374.0 |
| gntr family transcriptional regulator | CLV75_3489 | Not Available | Negative | 3493156 - 3493839 | 25253.4 |
| putrescine transport system substrate-binding protein | CLV75_3490 | Not Available | Positive | 3493980 - 3495065 | 39777.7 |
| putrescine transport system atp-binding protein | CLV75_3491 | Not Available | Positive | 3495136 - 3496263 | 42069.3 |
| putrescine transport system permease protein | CLV75_3492 | Not Available | Positive | 3496263 - 3497153 | 33466.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
