Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin transport system substrate-specific component | CLV75_3473 | Not Available | Positive | 3478026 - 3478613 | 20024.6 |
| biotin synthase | CLV75_3474 | Not Available | Positive | 3478606 - 3479571 | 35393.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CLV75_3475 | Not Available | Positive | 3479663 - 3480490 | 29541.2 |
| rieske 2fe-2s family protein | CLV75_3476 | Not Available | Negative | 3480546 - 3481733 | 44453.5 |
| hypothetical protein | CLV75_3477 | Not Available | Positive | 3481838 - 3482110 | 10127.7 |
| tetr family transcriptional regulator | CLV75_3478 | Not Available | Positive | 3482122 - 3482715 | 21951.3 |
| hypothetical protein | CLV75_3479 | Not Available | Positive | 3482717 - 3483097 | 13584.2 |
| amino acid abc transporter substrate-binding protein (paat family) | CLV75_3480 | Not Available | Negative | 3483094 - 3484152 | 38991.8 |
| succinyldiaminopimelate desuccinylase | CLV75_3481 | Not Available | Positive | 3484360 - 3485499 | 40524.1 |
| hypothetical protein | CLV75_3482 | Not Available | Positive | 3485503 - 3486078 | 21193.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
