Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_3442 | Not Available | Positive | 3450228 - 3450322 | 3344.8 |
| phosphoserine aminotransferase | CLV75_3444 | Not Available | Positive | 3450516 - 3451670 | 41282.1 |
| d-3-phosphoglycerate dehydrogenase | CLV75_3445 | Not Available | Positive | 3451728 - 3453323 | 56474.3 |
| serine/threonine protein phosphatase 1 | CLV75_3446 | Not Available | Positive | 3453448 - 3454176 | 27316.6 |
| malonyl-coa/methylmalonyl-coa synthetase | CLV75_3447 | Not Available | Negative | 3454180 - 3455697 | 55128.0 |
| gntr family transcriptional regulator | CLV75_3448 | Not Available | Negative | 3455765 - 3456469 | 26668.5 |
| formiminoglutamate deiminase | CLV75_3449 | Not Available | Negative | 3456473 - 3457828 | 48998.9 |
| imidazolonepropionase | CLV75_3450 | Not Available | Positive | 3457952 - 3459115 | 41114.1 |
| histidine ammonia-lyase | CLV75_3451 | Not Available | Positive | 3459112 - 3460647 | 53433.3 |
| formiminoglutamase | CLV75_3452 | Not Available | Positive | 3460647 - 3461438 | 29153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
