Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctm subunit | CLV75_3417 | Not Available | Negative | 3426241 - 3427536 | 45474.7 |
| c4-dicarboxylate transporter dctq subunit | CLV75_3418 | Not Available | Negative | 3427533 - 3428108 | 22150.5 |
| tripartite atp-independent transporter dctp family solute receptor | CLV75_3419 | Not Available | Negative | 3428138 - 3429148 | 36600.2 |
| putative dehydrogenase | CLV75_3420 | Not Available | Negative | 3429251 - 3430333 | 39529.7 |
| gntr family transcriptional regulator | CLV75_3421 | Not Available | Positive | 3430543 - 3431196 | 24681.5 |
| transglycosylase-like protein with slt domain | CLV75_3422 | Not Available | Negative | 3431720 - 3432220 | 19012.0 |
| s-adenosylmethionine uptake transporter | CLV75_3423 | Not Available | Negative | 3432296 - 3433282 | 36182.4 |
| arylsulfatase | CLV75_3424 | Not Available | Positive | 3433526 - 3435136 | 60346.8 |
| g3e family gtpase | CLV75_3426 | Not Available | Positive | 3436487 - 3437467 | 35952.3 |
| n-ethylmaleimide reductase | CLV75_3428 | Not Available | Negative | 3439109 - 3440215 | 39922.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
