Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa14 domain-containing protein | CLV75_3385 | Not Available | Negative | 3396748 - 3397326 | 21193.4 |
| asnc family transcriptional regulator | CLV75_3386 | Not Available | Negative | 3397446 - 3397898 | 16307.6 |
| threonine/homoserine/homoserine lactone efflux protein | CLV75_3387 | Not Available | Positive | 3397972 - 3398568 | 21494.0 |
| arac family transcriptional regulator | CLV75_3388 | Not Available | Negative | 3398570 - 3399403 | 30710.4 |
| hypothetical protein | CLV75_3389 | Not Available | Negative | 3399536 - 3400312 | 29098.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CLV75_3390 | Not Available | Positive | 3400389 - 3401351 | 34657.6 |
| lytic murein transglycosylase | CLV75_3391 | Not Available | Negative | 3401356 - 3402486 | 39802.7 |
| gntr family transcriptional regulator | CLV75_3392 | Not Available | Negative | 3402599 - 3403246 | 23881.4 |
| hypothetical protein | CLV75_3393 | Not Available | Negative | 3403277 - 3403969 | 25980.2 |
| uncharacterized protein (tigr02300 family) | CLV75_3394 | Not Available | Positive | 3404070 - 3404393 | 11888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
