Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agcs family alanine or glycine:cation symporter | CLV75_3375 | Not Available | Negative | 3386943 - 3388496 | 54453.6 |
| nucleotide-binding universal stress uspa family protein | CLV75_3376 | Not Available | Negative | 3388508 - 3388945 | 15668.8 |
| pyruvate kinase | CLV75_3377 | Not Available | Negative | 3389189 - 3390634 | 51485.9 |
| putative n-formylglutamate amidohydrolase | CLV75_3378 | Not Available | Positive | 3390753 - 3391490 | 27550.8 |
| hypothetical protein | CLV75_3379 | Not Available | Positive | 3391579 - 3391818 | 9294.79 |
| hypothetical protein | CLV75_3380 | Not Available | Positive | 3391922 - 3392236 | 12097.3 |
| d-alanine transaminase | CLV75_3381 | Not Available | Negative | 3392503 - 3393363 | 31584.8 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | CLV75_3382 | Not Available | Negative | 3393399 - 3394364 | 34425.3 |
| putative nad-dependent epimerase/dehydratase family protein | CLV75_3383 | Not Available | Negative | 3394440 - 3395441 | 35623.9 |
| beta-methylmalyl-coa/l-malyl-coa lyase | CLV75_3384 | Not Available | Positive | 3395737 - 3396699 | 34269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
