Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative solute:sodium symporter small subunit | CLV75_0298 | Not Available | Negative | 292310 - 292594 | 10435.5 |
| adenylate kinase | CLV75_0299 | Not Available | Negative | 292777 - 293460 | 23901.3 |
| acetyl-coenzyme a synthetase | CLV75_0300 | Not Available | Negative | 293468 - 295432 | 72315.3 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_0301 | Not Available | Positive | 295841 - 296857 | 36614.9 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | CLV75_0302 | Not Available | Positive | 296918 - 297547 | 22927.4 |
| tripartite atp-independent transporter dctm subunit | CLV75_0303 | Not Available | Positive | 297551 - 298954 | 49063.8 |
| ornithine cyclodeaminase | CLV75_0304 | Not Available | Negative | 299005 - 300045 | 37801.3 |
| hypothetical protein | CLV75_0305 | Not Available | Negative | 300055 - 300975 | 33463.5 |
| arginase | CLV75_0306 | Not Available | Negative | 300975 - 301895 | 32963.3 |
| asnc family transcriptional regulator | CLV75_0307 | Not Available | Positive | 301982 - 302410 | 15917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
