Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | CLV75_3333 | Not Available | Negative | 3344966 - 3347362 | 86216.1 |
| quercetin dioxygenase-like cupin family protein | CLV75_3334 | Not Available | Negative | 3347440 - 3347847 | 14155.7 |
| polyhydroxybutyrate depolymerase | CLV75_3335 | Not Available | Negative | 3347908 - 3348711 | 29720.1 |
| phenylalanyl-trna synthetase alpha subunit | CLV75_3336 | Not Available | Negative | 3349622 - 3350695 | 39714.3 |
| glutamate--cysteine ligase | CLV75_3337 | Not Available | Negative | 3350766 - 3352136 | 50877.5 |
| hypothetical protein | CLV75_3338 | Not Available | Negative | 3352204 - 3352731 | 18918.2 |
| acetyltransferase (gnat) family protein | CLV75_3339 | Not Available | Negative | 3352728 - 3353573 | 31179.0 |
| 16s rrna (uracil1498-n3)-methyltransferase | CLV75_3340 | Not Available | Negative | 3353573 - 3354298 | 26683.1 |
| 4-hydroxybenzoate polyprenyltransferase | CLV75_3341 | Not Available | Positive | 3354311 - 3355273 | 35381.3 |
| oop family ompa-ompf porin | CLV75_3342 | Not Available | Positive | 3355340 - 3357238 | 67743.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
