Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | CLV75_3303 | Not Available | Negative | 3318386 - 3318940 | 19821.8 |
| dsbc/dsbd-like thiol-disulfide interchange protein | CLV75_3304 | Not Available | Positive | 3319089 - 3319901 | 28439.0 |
| adp-ribose pyrophosphatase yjhb (nudix family) | CLV75_3305 | Not Available | Positive | 3319906 - 3320340 | 15682.8 |
| multidrug efflux pump subunit acrb | CLV75_3306 | Not Available | Negative | 3320320 - 3323721 | 123494.0 |
| hlyd family secretion protein | CLV75_3307 | Not Available | Negative | 3323727 - 3325184 | 52061.9 |
| molybdenum cofactor biosynthesis protein b | CLV75_3308 | Not Available | Negative | 3325290 - 3325832 | 20015.8 |
| threonine/homoserine/homoserine lactone efflux protein | CLV75_3309 | Not Available | Negative | 3325839 - 3326459 | 21284.7 |
| icc-related predicted phosphoesterase | CLV75_3310 | Not Available | Negative | 3326456 - 3327055 | 21098.1 |
| dna polymerase | CLV75_3311 | Not Available | Negative | 3327052 - 3327891 | 30597.5 |
| hypothetical protein | CLV75_3312 | Not Available | Positive | 3327937 - 3328515 | 19809.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
