Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i) | CLV75_3273 | Not Available | Positive | 3291847 - 3292680 | 30610.6 |
| acetyl-coa acetyltransferase | CLV75_3274 | Not Available | Positive | 3292874 - 3294049 | 40796.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-coa reductase | CLV75_3275 | Not Available | Positive | 3294237 - 3294959 | 25436.2 |
| lysr family transcriptional regulator | CLV75_3276 | Not Available | Positive | 3295263 - 3296210 | 35129.1 |
| eama domain-containing membrane protein rard | CLV75_3277 | Not Available | Positive | 3296207 - 3297073 | 29565.8 |
| hypothetical protein | CLV75_3278 | Not Available | Negative | 3297070 - 3297234 | 6160.55 |
| trna1(val) a37 n6-methylase trmn6 | CLV75_3279 | Not Available | Negative | 3297350 - 3298129 | 27816.6 |
| putative signal transducing protein | CLV75_3280 | Not Available | Negative | 3298126 - 3298341 | 7981.8 |
| octaprenyl-diphosphate synthase | CLV75_3281 | Not Available | Positive | 3298398 - 3299396 | 35801.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | CLV75_3282 | Not Available | Negative | 3299389 - 3300210 | 28372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
