Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | CLV75_3203 | Not Available | Negative | 3226337 - 3227194 | 30470.7 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | CLV75_3204 | Not Available | Positive | 3227282 - 3228454 | 39474.5 |
| utp--glnb (protein pii) uridylyltransferase glnd | CLV75_3205 | Not Available | Positive | 3228414 - 3231233 | 106478.0 |
| putative peptidoglycan lipid ii flippase | CLV75_3206 | Not Available | Positive | 3231230 - 3232771 | 55454.0 |
| rhomboid family protein | CLV75_3207 | Not Available | Negative | 3232779 - 3233465 | 24789.8 |
| tryptophanyl-trna synthetase | CLV75_3208 | Not Available | Positive | 3233552 - 3234580 | 37810.4 |
| leucine dehydrogenase | CLV75_3209 | Not Available | Negative | 3234643 - 3235692 | 36857.0 |
| asnc family transcriptional regulator | CLV75_3210 | Not Available | Positive | 3235822 - 3236274 | 17031.7 |
| branched-chain amino acid aminotransferase | CLV75_3211 | Not Available | Positive | 3236342 - 3237205 | 31559.3 |
| nucleotide-binding universal stress uspa family protein | CLV75_3212 | Not Available | Positive | 3237279 - 3237734 | 16573.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
